Tag Archives: R software

PMean: Changes to the Introduction to R, SAS, and SPSS classes

I have helped develop and have taught (along with other faculty in our department) three one credit hour pass/fail classes: Introduction to R, Introduction to SPSS, and Introduction to SAS. These classes were developed back in 2014-2015 and they are in need of some serious updates. I will try to outline some of the updates that I think these classes need in this blog post. Continue reading

Recommended: Cleaning Words with R: Stemming, Lemmatization & Replacing with More Common Synonym

In many text mining or natural language processing applications, you will have problems with words that are very similar, but which are counted separately. An example might be the words win, winner, and winning. You can combine these words into a single category using stemming. This blog post gives a nice overview of stemming. Continue reading

PMean: Do you need to name your function arguments in R?

If you program anything in R, you’ll end up calling a lot of functions. You pass your data or your constants to these functions, and you can do it in one of two ways. You can either pass the data/constants in the order in which the function expects the arguments or you can match each data/constant value with a particular argument name. This came up in the context of a question: do I need to save everything using


or can I save it with

save.image(“foo.RData”)? Continue reading

PMean: My work on a CTSA grant

I’m on a Clincal and Translational Science Award (CTSA) research grant (5UL1TR000001-05, formerly 1U54RR031295-01A1), which is pretty cool. My name is even mentioned a few times in the grant. I thought that as I plan what I would do for this grant, I would see what the grant promised and write down what, exactly, that those promises mean. As I talk with various people (especially Russ Waitman, who is supervising my work on this grant), I will revise and update my plans. Still, I thought it would be valuable to put some thoughts down now, both to help me focus on what I should be doing and to offer an early draft of those ideas to the various people that I will end up interacting with. Continue reading

Recommended: beanumber repository

This is the github repository of Ben Baumer. He is one of the co-authors of “Modern Data Science with R” and the data and code from that book is available here. He also provides code and data for OpenWAR, an open source method for calculating a baseball statistic, Wins Above Replacement. Finally, there is an R library for extracting, transforming, and loading “medium” sized datasets into SQL. Medium here means multi-gigabyte sized files. Related to this are a couple of “medium” sized data sets from the Internet Movie Database and from the NYC CitiBike dataset. Continue reading